Original Papers- OBAYASHI Takeshi -
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[2019]
1.Lipid remodeling regulator 1 (LRL1) is differently involved in the phosphorus-depletion response from PSR1 in Chlamydomonas reinhardtii..[The Plant journal : for cell and molecular biology,100(3),(2019),610-626]Nur A Hidayati, Yui Yamada-Oshima, Masako Iwai, Takashi Yamano, Masataka Kajikawa, Nozomu Sakurai, Kunihiro Suda, Kanami Sesoko, Koichi Hori, Takeshi Obayashi, Mie Shimojima, Hideya Fukuzawa, Hiroyuki Ohta
10.1111/tpj.14473
http://www.ncbi.nlm.nih.gov/pubmed/31350858
[2018]
2.COXPRESdb v7: a gene coexpression database for 11 animal species supported by 23 coexpression platforms for technical evaluation and evolutionary inference..[Nucleic acids research,(2018)]Obayashi T, Kagaya Y, Aoki Y, Tadaka S, Kinoshita K
10.1093/nar/gky1155
http://www.ncbi.nlm.nih.gov/pubmed/30462320
3.ATTED-II in 2018: A Plant Coexpression Database Based on Investigation of the Statistical Property of the Mutual Rank Index..[Plant & cell physiology,59(2),(2018),440-]Obayashi T, Aoki Y, Tadaka S, Kagaya Y, Kinoshita K
10.1093/pcp/pcx209
http://www.ncbi.nlm.nih.gov/pubmed/29340653
4.ATTED-II in 2018: A Plant Coexpression Database Based on Investigation of the Statistical Property of the Mutual Rank Index..[Plant & cell physiology,59(1),(2018),e3-]Obayashi T, Aoki Y, Tadaka S, Kagaya Y, Kinoshita K
10.1093/pcp/pcx191
http://www.ncbi.nlm.nih.gov/pubmed/29216398
[2017]
5.Arabinogalactan Proteins Accumulate in the Cell Walls of Searching Hyphae of the Stem Parasitic Plants, Cuscuta campestris and Cuscuta japonica.[PLANT AND CELL PHYSIOLOGY,58(11),(2017),1868-1877]Akitaka Hozumi, Subhankar Bera, Daiki Fujiwara, Takeshi Obayashi, Ryusuke Yokoyama, Kazuhiko Nishitani, Koh Aoki
10.1093/pcp/pcx121
http://www.ncbi.nlm.nih.gov/pubmed/29016904 http://gateway.isiknowledge.com/gateway/Gateway.cgi?&GWVersion=2&SrcAuth=TohokuUniv&SrcApp=TohokuUniv&DestLinkType=FullRecord&KeyUT=WOS:000415096300006&DestApp=WOS
6.Root-Knot and Cyst Nematodes Activate Procambium-Associated Genes in Arabidopsis Roots.[FRONTIERS IN PLANT SCIENCE,8,(2017),1195-]Yasuka L. Yamaguchi, Reira Suzuki, Javier Cabrera, Satoru Nakagami, Tomomi Sagara, Chika Ejima, Ryosuke Sano, Yuichi Aoki, Rocio Olmo, Tetsuya Kurata, Takeshi Obayashi, Taku Demura, Takashi Ishida, Carolina Escobar, Shinichiro Sawa
10.3389/fpls.2017.01195
http://www.ncbi.nlm.nih.gov/pubmed/28747918 http://gateway.isiknowledge.com/gateway/Gateway.cgi?&GWVersion=2&SrcAuth=TohokuUniv&SrcApp=TohokuUniv&DestLinkType=FullRecord&KeyUT=WOS:000406019700001&DestApp=WOS
7.Co-expressed Pathways DataBase for Tomato: a database to predict pathways relevant to a query gene.[BMC GENOMICS,18(1),(2017),437-]Takafumi Narise, Nozomu Sakurai, Takeshi Obayashi, Hiroyuki Ohta, Daisuke Shibata
10.1186/s12864-017-3786-3
http://www.ncbi.nlm.nih.gov/pubmed/28583129 http://gateway.isiknowledge.com/gateway/Gateway.cgi?&GWVersion=2&SrcAuth=TohokuUniv&SrcApp=TohokuUniv&DestLinkType=FullRecord&KeyUT=WOS:000404077700005&DestApp=WOS
8.Editorial: Plant and Cell Physiology's 2017 Database Issue.[PLANT AND CELL PHYSIOLOGY,58(1),(2017),1-3]Hajime Ohyanagi, Takeshi Obayashi, Kentaro Yano
10.1093/pcp/pcw227
http://www.ncbi.nlm.nih.gov/pubmed/28158372 http://gateway.isiknowledge.com/gateway/Gateway.cgi?&GWVersion=2&SrcAuth=TohokuUniv&SrcApp=TohokuUniv&DestLinkType=FullRecord&KeyUT=WOS:000397133100011&DestApp=WOS
9.Plant Aurora kinases interact with and phosphorylate transcription factors..[J Plant Res,(2017)]Mai, Takagi Takuya, Sakamoto Ritsuko, Suzuki Keiichiro, Nemoto Daisuke, Kurihara Takeshi, Obayashi Matsunaga TM Hirakawa T Kurihara D Nariai Y Urano T Tatsuya, Sawasaki Sachihiro, Matsunaga
[2016]
10.ATTED-II in 2016: A Plant Coexpression Database Towards Lineage-Specific Coexpression..[Plant Cell Physiol,57(1),(2016),e5]Aoki, Yuichi Okamura, Yasunobu Tadaka, Shu Kinoshita, Kengo Obayashi, Takeshi
10.1093/pcp/pcv165
http://www.ncbi.nlm.nih.gov/pubmed/26546318
11.ALCOdb: Gene Coexpression Database for Microalgae..[Plant Cell Physiol,57(1),(2016),e3]Aoki, Yuichi Okamura, Yasunobu Ohta, Hiroyuki Kinoshita, Kengo Obayashi, Takeshi
10.1093/pcp/pcv190
http://www.ncbi.nlm.nih.gov/pubmed/26644461
12.Editorial: Plant and Cell Physiology's 2016 Online Database Issue..[Plant Cell Physiol,57(1),(2016),1-3]Ohyanagi, Hajime Obayashi, Takeshi Yano, Kentaro
10.1093/pcp/pcv205
http://www.ncbi.nlm.nih.gov/pubmed/26801748
[2015]
13.COXPRESdb in 2015: coexpression database for animal species by DNA-microarray and RNAseq-based expression data with multiple quality assessment systems..[Nucleic Acids Res,43(Database issue),(2015),D82-D86]Okamura, Yasunobu Aoki, Yuichi Obayashi, Takeshi Tadaka, Shu Ito, Satoshi Narise, Takafumi Kinoshita, Kengo
10.1093/nar/gku1163
http://www.ncbi.nlm.nih.gov/pubmed/25392420
14.Editorial: Plant and Cell Physiology's 2015 database issue..[Plant Cell Physiol,56(1),(2015),4-6]Ohyanagi, Hajime Obayashi, Takeshi Yano, Kentaro
http://www.ncbi.nlm.nih.gov/pubmed/25756138
15.Comparison of Gene Coexpression Profiles and Construction of Conserved Gene Networks to Find Functional Modules..[PLoS One,10(7),(2015),e0132039]Okamura, Yasunobu Obayashi, Takeshi Kinoshita, Kengo
10.1371/journal.pone.0132039
http://www.ncbi.nlm.nih.gov/pubmed/26147120
[2014]
16.ATTED-II in 2014: evaluation of gene coexpression in agriculturally important plants..[Plant Cell Physiol,55(1),(2014),e6]Obayashi, Takeshi Okamura, Yasunobu Ito, Satoshi Tadaka, Shu Aoki, Yuichi Shirota, Matsuyuki Kinoshita, Kengo
10.1093/pcp/pct178
http://www.ncbi.nlm.nih.gov/pubmed/24334350
17.Plant and cell physiology 2014 online database issue..[Plant Cell Physiol,55(1),(2014),1-2]Obayashi, Takeshi Yano, Kentaro
10.1093/pcp/pct193
http://www.ncbi.nlm.nih.gov/pubmed/24415768
18.Molecular and cellular features of murine craniofacial and trunk neural crest cells as stem cell-like cells..[PLoS One,9(1),(2014),e84072]Hagiwara, Kunie Obayashi, Takeshi Sakayori, Nobuyuki Yamanishi, Emiko Hayashi, Ryuhei Osumi, Noriko Nakazawa, Toru Nishida, Kohji
10.1371/journal.pone.0084072
http://www.ncbi.nlm.nih.gov/pubmed/24465393
[2013]
19.Basic helix-loop-helix transcription factors JASMONATE-ASSOCIATED MYC2-LIKE1 (JAM1), JAM2, and JAM3 are negative regulators of jasmonate responses in Arabidopsis..[Plant Physiol,163(1),(2013),291-304]Sasaki-Sekimoto, Yuko Jikumaru, Yusuke Obayashi, Takeshi Saito, Hikaru Masuda, Shinji Kamiya, Yuji Ohta, Hiroyuki Shirasu, Ken
10.1104/pp.113.220129
http://www.ncbi.nlm.nih.gov/pubmed/23852442
20.Dmrta1 regulates proneural gene expression downstream of Pax6 in the mammalian telencephalon..[Genes Cells,18(8),(2013),636-649]Kikkawa, Takako Obayashi, Takeshi Takahashi, Masanori Fukuzaki-Dohi, Urara Numayama-Tsuruta, Keiko Osumi, Noriko
10.1111/gtc.12061
http://www.ncbi.nlm.nih.gov/pubmed/23679989
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